When I was on Clomid, my temps soared through the roof. I would take them during the day as well, when I was feeling hot, and they would always be high.
Good luck to you Candice! As for the progesterone...if there's a specific reason that they put you on it--low progesterone, short LP, then I would take it. I'm still taking mine--I have to take it until I'm 12 weeks along.